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Single Cell Unit public / primed_track
MIT LicenseCode for the paper: Welling, Mohr, et al. "Primed Track, high-fidelity lineage tracing in mouse pre-implantation embryos using primed conversion of photoconvertible proteins".
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patrikd / cossmosLib
Non-Profit Open Software License 3.0Updated -
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Kokic et al. Minimisation of surface energy drives apical epithelial organisation and gives rise to Lewis’ law
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Vetter, Kokic et al. Aboav-Weaire’s law in epithelia results from an angle constraint in contiguous polygonal lattices
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Peter Ruppen / AFG2225 library
GNU General Public License v3.0 onlyPython library for communication with GW Instek AFG-2225 function generator.
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A Shh/Gli-driven three-node timer motif controls temporal identity and fate of neural stem cells.
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Level difference model of somite formation.
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Alessio Buccino / HDsort
MIT LicenseUpdated -
Graph-based algorithm to compute propagation velocity in Python
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Aaron Ponti / Qu
Apache License 2.0Qu is an attempt to make the full deep learning workflow more interactive by providing a user interface (implemented as napari widget) that abstracts all steps from ground truth generation and curation to training and prediction.
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Conrad, Runser, Gómez, Lang et al., The Biomechanical Basis of Biased Epithelial Tube Elongation in Lung and Kidney Development
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Python package to register Mea1k, Dualmode, and NeuroCMOS chips to microscope stages
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Track spike sorted units across multiple recording sessions.
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Collection of template scripts to perform spike sorting at BEL
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