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Roboliq - software for controlling liquid handling robots

This is the GUI for CellX, a tool for segmentation, fluorescence quantification, and tracking of cells on microscopy images.

Python wrapper for the Nikon ND2 SDK.

Topological filtering method: model space exploration for ODE models based on approximate parameter space exploration. Initially described in: Sunnåker, M. et al., 2013, Sci Signal, 6(277), p.ra41.

Code and data for paper: Dempsey W. P., Hodas N. O., Ponti A. and Pantazis P. Determination of the source of SHG verniers in zebrafish skeletal muscle. Scientific Reports 5:18119. 2015.

MATLAB implementation of the parameter space exploration method described in: Zamora-Sillero, E. et al., 2011. Efficient characterization of high-dimensional parameter spaces for systems biology. BMC Systems Biology, 5, p.142.