Explore projects

Code repository for the Practical Course "Methods in Cell Analysis and Laboratory Automation" (Biotechnology Master Students).

Chi.Bio modifications made by Peter Ruppen

Zhang et al. Notch2 signaling regulates Id4 and cell cycle genes to maintain neural stem cell quiescence in the adult hippocampus.

Collaboration with Taylor Lab

Level difference model of somite formation.

A Shh/Gli-driven three-node timer motif controls temporal identity and fate of neural stem cells.

Software package for mapping pixel coordinates to physical world coordinates for colony picking from agar plate.

Code and other material for the "Writing napari plug-ins" introductory course.

Code for the paper: Welling, Mohr, et al. "Primed Track, high-fidelity lineage tracing in mouse pre-implantation embryos using primed conversion of photoconvertible proteins".

DOI: https://doi.org/10.7554/eLife.44491

Collection of ImarisXT based projects.

Application of global two stage methodology to single cell data to infer kinetic Non-linear mixed effect models of signalling.

V-pipe is a pipeline designed for analysing NGS data of short viral genomes https://cbg-ethz.github.io/V-pipe/