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Code for internal projects with BSSE users.

Python package to register Mea1k, Dualmode, and NeuroCMOS chips to microscope stages

Collection of third-party tools and libraries for MATLAB.

SpikeInterface extractors for BEL chips

Code and data for paper: Dempsey W. P., Hodas N. O., Ponti A. and Pantazis P. Determination of the source of SHG verniers in zebrafish skeletal muscle. Scientific Reports 5:18119. 2015.

Supplementary code for the paper: Aizhan Tastanova et al. "A biomedical tattoo system for early detection of cancer-associated hypercalcemia".

Python wrapper for the Nikon ND2 SDK.

Vetter, Kokic et al. Aboav-Weaire’s law in epithelia results from an angle constraint in contiguous polygonal lattices

Neuron models with example notebooks and scripts to generate the figures in the manuscript: "Tracking axon initial segment plasticity using high-density microelectrode arrays: A computational study"

pIceImarisConnector is a simple python class that eases communication between Bitplane Imaris (http://www.bitplane.com) and python (http://www.python.org) using the Imaris XT interface (http://www.bitplane.com/go/products/imarisxt).

Software tools for cell tracking and lineage reconstruction in 2D microbial cell cultures

Wrapper around StarDist to make it easier to use for end-users.