Explore projects

Code for publication 'Robustness and innovation in synthetic genotype networks' https://www.nature.com/articles/s41467-023-38033-3

Python library for communication with GW Instek AFG-2225 function generator.

A small example demonstrating how tricky it is to solve for the capacity constraints

Wrapper around StarDist to make it easier to use for end-users.

Software tools for cell tracking and lineage reconstruction in 2D microbial cell cultures

pIceImarisConnector is a simple python class that eases communication between Bitplane Imaris (http://www.bitplane.com) and python (http://www.python.org) using the Imaris XT interface (http://www.bitplane.com/go/products/imarisxt).

Neuron models with example notebooks and scripts to generate the figures in the manuscript: "Tracking axon initial segment plasticity using high-density microelectrode arrays: A computational study"

Test repo for mirroring

M. Meer, R. Vetter, A. Iannini, G. Villa-Fombuena, H. Gómez, L. Hodel, F. Casares, D. Iber, Minimisation of surface energy drives apical epithelial organisation and gives rise to Lewis’ law and Aboav-Weaire’s law