Version 0.9.3
preview feature:
- produce tables that can be used for LolliPop
- tabmut: --add-mutations - add mutations strings to tabmut
Necessary for using "bootstraping" confidence intervals in LolliPop
- coocmutbamscan: --fix-subsets - subset of coocurrating mutations
Fix variants attribution when cooccurrence are subset/superset of other variants:
if var 1 has mutations A, B and C and var 2 has muations A and B
amplicon with mutations A and B is flagged to both var 1 and 2